Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.06□□□□□ -0.16
Six5P70178 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.06□□□□□ -0.16
Six5P70178 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.06□□□□□ -0.16
Six5P70178 Psmb5-202ENSMUST00000227257 622 ntBASIC14.06□□□□□ -0.16
Six5P70178 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Six5P70178 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Six5P70178 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Six5P70178 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Six5P70178 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six5P70178 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Six5P70178 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.05□□□□□ -0.16
Six5P70178 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Six5P70178 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 Gm1401-201ENSMUST00000122048 772 ntBASIC14.05□□□□□ -0.16
Six5P70178 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.05□□□□□ -0.16
Six5P70178 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Six5P70178 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.05□□□□□ -0.16
Six5P70178 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Six5P70178 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Six5P70178 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Six5P70178 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Six5P70178 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Six5P70178 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.04□□□□□ -0.16
Six5P70178 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Gm12008-201ENSMUST00000117791 755 ntBASIC14.04□□□□□ -0.16
Six5P70178 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.04□□□□□ -0.16
Six5P70178 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.04□□□□□ -0.16
Six5P70178 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.04□□□□□ -0.16
Six5P70178 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Six5P70178 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Six5P70178 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Six5P70178 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Six5P70178 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Six5P70178 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Six5P70178 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Six5P70178 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.03□□□□□ -0.16
Six5P70178 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six5P70178 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.03□□□□□ -0.16
Six5P70178 Gm2272-201ENSMUST00000194903 582 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms