Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ybx1P62960 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.36■□□□□ 0.05
Ybx1P62960 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Gm9824-201ENSMUST00000178707 561 ntBASIC15.36■□□□□ 0.05
Ybx1P62960 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Gm5745-201ENSMUST00000183748 313 ntBASIC15.36■□□□□ 0.05
Ybx1P62960 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.36■□□□□ 0.05
Ybx1P62960 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ybx1P62960 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ybx1P62960 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Ybx1P62960 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.36■□□□□ 0.05
Ybx1P62960 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Ybx1P62960 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ybx1P62960 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Ybx1P62960 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.35■□□□□ 0.05
Ybx1P62960 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.35■□□□□ 0.05
Ybx1P62960 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ybx1P62960 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.35■□□□□ 0.05
Ybx1P62960 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Ybx1P62960 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.35■□□□□ 0.05
Ybx1P62960 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.35■□□□□ 0.05
Ybx1P62960 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Gm27989-201ENSMUST00000184721 107 ntBASIC15.35■□□□□ 0.05
Ybx1P62960 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.35■□□□□ 0.05
Ybx1P62960 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.35■□□□□ 0.05
Ybx1P62960 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.35■□□□□ 0.05
Ybx1P62960 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.35■□□□□ 0.05
Ybx1P62960 Gm6888-201ENSMUST00000221983 706 ntBASIC15.35■□□□□ 0.05
Ybx1P62960 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ybx1P62960 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.35■□□□□ 0.05
Ybx1P62960 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.35■□□□□ 0.05
Ybx1P62960 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ybx1P62960 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ybx1P62960 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Gm23547-201ENSMUST00000158210 271 ntBASIC15.34■□□□□ 0.05
Ybx1P62960 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.34■□□□□ 0.05
Ybx1P62960 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.34■□□□□ 0.05
Ybx1P62960 Gm2423-201ENSMUST00000074863 733 ntBASIC15.34■□□□□ 0.05
Ybx1P62960 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ybx1P62960 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ybx1P62960 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ybx1P62960 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Ybx1P62960 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ybx1P62960 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ybx1P62960 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.33■□□□□ 0.05
Ybx1P62960 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ybx1P62960 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ybx1P62960 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ybx1P62960 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Ybx1P62960 Gm18737-201ENSMUST00000173594 937 ntBASIC15.33■□□□□ 0.04
Ybx1P62960 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ybx1P62960 Gm27920-201ENSMUST00000183953 96 ntBASIC15.33■□□□□ 0.04
Ybx1P62960 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.33■□□□□ 0.04
Ybx1P62960 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.33■□□□□ 0.04
Ybx1P62960 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.33■□□□□ 0.04
Ybx1P62960 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.33■□□□□ 0.04
Ybx1P62960 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ybx1P62960 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms