Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm3P62311 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.73□□□□□ -0.21
Lsm3P62311 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm3P62311 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Lsm3P62311 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Trmt13-210ENSMUST00000198454 880 ntBASIC13.73□□□□□ -0.21
Lsm3P62311 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.73□□□□□ -0.21
Lsm3P62311 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.73□□□□□ -0.21
Lsm3P62311 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Lsm3P62311 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Lsm3P62311 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Lsm3P62311 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.72□□□□□ -0.21
Lsm3P62311 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.72□□□□□ -0.21
Lsm3P62311 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Lsm3P62311 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lsm3P62311 Gm7370-201ENSMUST00000219471 767 ntBASIC13.72□□□□□ -0.21
Lsm3P62311 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Lsm3P62311 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Lsm3P62311 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Lsm3P62311 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Lsm3P62311 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Lsm3P62311 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.71□□□□□ -0.21
Lsm3P62311 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lsm3P62311 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lsm3P62311 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Gm5643-201ENSMUST00000117081 966 ntBASIC13.71□□□□□ -0.21
Lsm3P62311 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.71□□□□□ -0.21
Lsm3P62311 Gm37179-201ENSMUST00000194862 823 ntBASIC13.71□□□□□ -0.21
Lsm3P62311 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.71□□□□□ -0.21
Lsm3P62311 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.71□□□□□ -0.21
Lsm3P62311 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Lsm3P62311 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm3P62311 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm3P62311 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm3P62311 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm3P62311 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.7□□□□□ -0.22
Lsm3P62311 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Lsm3P62311 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Lsm3P62311 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Lsm3P62311 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm3P62311 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.7□□□□□ -0.22
Lsm3P62311 Gm10602-201ENSMUST00000098239 609 ntBASIC13.7□□□□□ -0.22
Lsm3P62311 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.7□□□□□ -0.22
Lsm3P62311 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm3P62311 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Lsm3P62311 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm3P62311 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms