Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44357-201ENSMUST00000195897 142 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm19658-201ENSMUST00000196231 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44367-201ENSMUST00000196836 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44350-201ENSMUST00000197197 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44390-201ENSMUST00000197533 144 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44313-201ENSMUST00000198018 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44486-201ENSMUST00000198508 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44314-201ENSMUST00000199263 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44394-201ENSMUST00000199558 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44484-201ENSMUST00000199873 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44466-201ENSMUST00000200264 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm44359-201ENSMUST00000200671 138 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.25□□□□□ -0.29
Sec61a1P61620 Gm7506-201ENSMUST00000207758 815 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.25□□□□□ -0.29
Sec61a1P61620 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sec61a1P61620 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sec61a1P61620 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sec61a1P61620 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Efs-202ENSMUST00000227037 2540 ntBASIC13.24□□□□□ -0.29
Sec61a1P61620 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.24□□□□□ -0.29
Sec61a1P61620 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.24□□□□□ -0.29
Sec61a1P61620 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sec61a1P61620 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sec61a1P61620 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sec61a1P61620 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.23□□□□□ -0.29
Sec61a1P61620 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Sec61a1P61620 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.23□□□□□ -0.29
Sec61a1P61620 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.23□□□□□ -0.29
Sec61a1P61620 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.23□□□□□ -0.29
Sec61a1P61620 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Sec61a1P61620 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.23□□□□□ -0.29
Sec61a1P61620 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sec61a1P61620 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sec61a1P61620 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Sec61a1P61620 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.22□□□□□ -0.29
Sec61a1P61620 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms