Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.78□□□□□ -0.68
Ube2d3P61079 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ube2d3P61079 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ube2d3P61079 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ube2d3P61079 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.77□□□□□ -0.68
Ube2d3P61079 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC10.77□□□□□ -0.68
Ube2d3P61079 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ube2d3P61079 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.77□□□□□ -0.68
Ube2d3P61079 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Ube2d3P61079 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ube2d3P61079 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ube2d3P61079 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ube2d3P61079 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ube2d3P61079 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Ube2d3P61079 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.77□□□□□ -0.69
Ube2d3P61079 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Gm7506-201ENSMUST00000207758 815 ntBASIC10.77□□□□□ -0.69
Ube2d3P61079 Gm8655-201ENSMUST00000221159 852 ntBASIC10.77□□□□□ -0.69
Ube2d3P61079 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.77□□□□□ -0.69
Ube2d3P61079 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC10.77□□□□□ -0.69
Ube2d3P61079 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Ube2d3P61079 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ube2d3P61079 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Ube2d3P61079 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Ube2d3P61079 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms