Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.92■□□□□ 0.62
Msh6P54276 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
Msh6P54276 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.92■□□□□ 0.62
Msh6P54276 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Msh6P54276 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Gm15321-201ENSMUST00000121290 288 ntBASIC18.92■□□□□ 0.62
Msh6P54276 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Msh6P54276 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Msh6P54276 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Gm42466-201ENSMUST00000202099 1301 ntBASIC18.92■□□□□ 0.62
Msh6P54276 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.92■□□□□ 0.62
Msh6P54276 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Msh6P54276 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Msh6P54276 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Msh6P54276 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.91■□□□□ 0.62
Msh6P54276 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.91■□□□□ 0.62
Msh6P54276 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Gm9794-201ENSMUST00000202370 423 ntBASIC18.91■□□□□ 0.62
Msh6P54276 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.91■□□□□ 0.62
Msh6P54276 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.91■□□□□ 0.62
Msh6P54276 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Msh6P54276 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Msh6P54276 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Msh6P54276 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Msh6P54276 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Msh6P54276 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Msh6P54276 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Gm12490-201ENSMUST00000120255 560 ntBASIC18.9■□□□□ 0.62
Msh6P54276 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.9■□□□□ 0.62
Msh6P54276 Gm24694-201ENSMUST00000180054 110 ntBASIC18.9■□□□□ 0.62
Msh6P54276 Gm27663-201ENSMUST00000184839 110 ntBASIC18.9■□□□□ 0.62
Msh6P54276 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.9■□□□□ 0.62
Msh6P54276 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.9■□□□□ 0.62
Msh6P54276 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.9■□□□□ 0.62
Msh6P54276 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.9■□□□□ 0.62
Msh6P54276 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Msh6P54276 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.9■□□□□ 0.62
Msh6P54276 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.9■□□□□ 0.62
Msh6P54276 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.9■□□□□ 0.62
Msh6P54276 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh6P54276 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Msh6P54276 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Msh6P54276 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Msh6P54276 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Msh6P54276 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.89■□□□□ 0.61
Msh6P54276 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh6P54276 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.89■□□□□ 0.61
Msh6P54276 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Msh6P54276 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Msh6P54276 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms