Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Shmt1P50431 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.85■□□□□ 0.13
Shmt1P50431 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Gm13365-201ENSMUST00000121188 973 ntBASIC15.85■□□□□ 0.13
Shmt1P50431 Gm11745-201ENSMUST00000121669 448 ntBASIC15.85■□□□□ 0.13
Shmt1P50431 Gm16026-204ENSMUST00000162652 683 ntBASIC15.85■□□□□ 0.13
Shmt1P50431 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.85■□□□□ 0.13
Shmt1P50431 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Shmt1P50431 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.85■□□□□ 0.13
Shmt1P50431 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Shmt1P50431 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shmt1P50431 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shmt1P50431 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shmt1P50431 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.84■□□□□ 0.13
Shmt1P50431 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.84■□□□□ 0.13
Shmt1P50431 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Shmt1P50431 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.84■□□□□ 0.13
Shmt1P50431 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.84■□□□□ 0.13
Shmt1P50431 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shmt1P50431 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Shmt1P50431 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Shmt1P50431 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.84■□□□□ 0.13
Shmt1P50431 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shmt1P50431 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Shmt1P50431 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shmt1P50431 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shmt1P50431 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shmt1P50431 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.83■□□□□ 0.13
Shmt1P50431 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.83■□□□□ 0.13
Shmt1P50431 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Shmt1P50431 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shmt1P50431 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.83■□□□□ 0.12
Shmt1P50431 Gm27494-201ENSMUST00000184735 189 ntBASIC15.83■□□□□ 0.12
Shmt1P50431 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.83■□□□□ 0.12
Shmt1P50431 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.83■□□□□ 0.12
Shmt1P50431 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.83■□□□□ 0.12
Shmt1P50431 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.83■□□□□ 0.12
Shmt1P50431 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shmt1P50431 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shmt1P50431 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.83■□□□□ 0.12
Shmt1P50431 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Shmt1P50431 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Shmt1P50431 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shmt1P50431 Sybu-209ENSMUST00000228639 4113 ntBASIC15.83■□□□□ 0.12
Shmt1P50431 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shmt1P50431 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Shmt1P50431 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shmt1P50431 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.82■□□□□ 0.12
Shmt1P50431 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.82■□□□□ 0.12
Shmt1P50431 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.82■□□□□ 0.12
Shmt1P50431 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Shmt1P50431 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt1P50431 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms