Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.17□□□□□ -0.3
GdnfP48540 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.17□□□□□ -0.3
GdnfP48540 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.17□□□□□ -0.3
GdnfP48540 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.17□□□□□ -0.3
GdnfP48540 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
GdnfP48540 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GdnfP48540 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GdnfP48540 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GdnfP48540 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
GdnfP48540 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.16□□□□□ -0.3
GdnfP48540 Gm9103-201ENSMUST00000119371 405 ntBASIC13.16□□□□□ -0.3
GdnfP48540 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.16□□□□□ -0.3
GdnfP48540 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
GdnfP48540 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.16□□□□□ -0.3
GdnfP48540 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.16□□□□□ -0.3
GdnfP48540 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.16□□□□□ -0.3
GdnfP48540 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.16□□□□□ -0.3
GdnfP48540 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
GdnfP48540 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.16□□□□□ -0.3
GdnfP48540 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.16□□□□□ -0.3
GdnfP48540 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
GdnfP48540 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GdnfP48540 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.15□□□□□ -0.3
GdnfP48540 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
GdnfP48540 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GdnfP48540 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.15□□□□□ -0.3
GdnfP48540 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.15□□□□□ -0.3
GdnfP48540 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
GdnfP48540 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.15□□□□□ -0.3
GdnfP48540 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC13.15□□□□□ -0.3
GdnfP48540 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
GdnfP48540 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.15□□□□□ -0.3
GdnfP48540 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.15□□□□□ -0.3
GdnfP48540 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GdnfP48540 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
GdnfP48540 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.15□□□□□ -0.3
GdnfP48540 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
GdnfP48540 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms