Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm45384-201ENSMUST00000210451 277 ntBASIC14.39□□□□□ -0.11
Sox18P43680 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.39□□□□□ -0.11
Sox18P43680 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.39□□□□□ -0.11
Sox18P43680 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox18P43680 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sox18P43680 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox18P43680 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Sox18P43680 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.38□□□□□ -0.11
Sox18P43680 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sox18P43680 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox18P43680 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Sox18P43680 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.38□□□□□ -0.11
Sox18P43680 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.38□□□□□ -0.11
Sox18P43680 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC14.38□□□□□ -0.11
Sox18P43680 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Gm8515-201ENSMUST00000194852 576 ntBASIC14.38□□□□□ -0.11
Sox18P43680 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Gm18049-201ENSMUST00000208909 581 ntBASIC14.38□□□□□ -0.11
Sox18P43680 Gm7775-201ENSMUST00000218871 853 ntBASIC14.38□□□□□ -0.11
Sox18P43680 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.38□□□□□ -0.11
Sox18P43680 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.38□□□□□ -0.11
Sox18P43680 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sox18P43680 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.38□□□□□ -0.11
Sox18P43680 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox18P43680 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox18P43680 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sox18P43680 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Gm15321-201ENSMUST00000121290 288 ntBASIC14.37□□□□□ -0.11
Sox18P43680 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.37□□□□□ -0.11
Sox18P43680 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.37□□□□□ -0.11
Sox18P43680 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.37□□□□□ -0.11
Sox18P43680 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.37□□□□□ -0.11
Sox18P43680 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sox18P43680 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.36□□□□□ -0.11
Sox18P43680 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.36□□□□□ -0.11
Sox18P43680 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sox18P43680 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sox18P43680 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sox18P43680 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms