Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Hist1h1aP43275 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Gm13836-201ENSMUST00000121159 501 ntBASIC12.41□□□□□ -0.42
Hist1h1aP43275 Olfr129-201ENSMUST00000122318 993 ntBASIC12.41□□□□□ -0.42
Hist1h1aP43275 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.41□□□□□ -0.42
Hist1h1aP43275 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.41□□□□□ -0.42
Hist1h1aP43275 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Hist1h1aP43275 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Gm15165-201ENSMUST00000118140 502 ntBASIC12.4□□□□□ -0.42
Hist1h1aP43275 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Gm19164-201ENSMUST00000210667 640 ntBASIC12.4□□□□□ -0.42
Hist1h1aP43275 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Hist1h1aP43275 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Hist1h1aP43275 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.4□□□□□ -0.43
Hist1h1aP43275 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Hist1h1aP43275 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Hist1h1aP43275 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Hist1h1aP43275 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Hist1h1aP43275 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms