Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.75■□□□□ 0.11
HttP42859 Gm3961-201ENSMUST00000204425 994 ntBASIC15.75■□□□□ 0.11
HttP42859 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.75■□□□□ 0.11
HttP42859 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.75■□□□□ 0.11
HttP42859 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HttP42859 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Gm15782-201ENSMUST00000121073 445 ntBASIC15.74■□□□□ 0.11
HttP42859 Gm29199-201ENSMUST00000187766 775 ntBASIC15.74■□□□□ 0.11
HttP42859 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HttP42859 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HttP42859 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.74■□□□□ 0.11
HttP42859 Gm6013-201ENSMUST00000212264 699 ntBASIC15.74■□□□□ 0.11
HttP42859 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.74■□□□□ 0.11
HttP42859 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.74■□□□□ 0.11
HttP42859 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Gm12384-201ENSMUST00000119228 919 ntBASIC15.74■□□□□ 0.11
HttP42859 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.74■□□□□ 0.11
HttP42859 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HttP42859 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
HttP42859 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HttP42859 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.73■□□□□ 0.11
HttP42859 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HttP42859 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Gm18753-201ENSMUST00000201000 566 ntBASIC15.73■□□□□ 0.11
HttP42859 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.73■□□□□ 0.11
HttP42859 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HttP42859 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.73■□□□□ 0.11
HttP42859 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HttP42859 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HttP42859 Gm7287-201ENSMUST00000205267 602 ntBASIC15.73■□□□□ 0.11
HttP42859 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.73■□□□□ 0.11
HttP42859 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HttP42859 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.72■□□□□ 0.11
HttP42859 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.72■□□□□ 0.11
HttP42859 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.72■□□□□ 0.11
HttP42859 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.72■□□□□ 0.11
HttP42859 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HttP42859 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.72■□□□□ 0.11
HttP42859 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.72■□□□□ 0.11
HttP42859 Gm37230-201ENSMUST00000194491 818 ntBASIC15.72■□□□□ 0.11
HttP42859 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HttP42859 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms