Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tnfsf9P41274 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Gm8396-201ENSMUST00000057361 823 ntBASIC14.35□□□□□ -0.11
Tnfsf9P41274 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tnfsf9P41274 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.34□□□□□ -0.11
Tnfsf9P41274 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gm44335-201ENSMUST00000196879 141 ntBASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gm44297-201ENSMUST00000198304 141 ntBASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gm44346-201ENSMUST00000198851 141 ntBASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gm20553-201ENSMUST00000204205 844 ntBASIC14.34□□□□□ -0.11
Tnfsf9P41274 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Tnfsf9P41274 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.34□□□□□ -0.11
Tnfsf9P41274 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Tnfsf9P41274 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf9P41274 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Tnfsf9P41274 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.33□□□□□ -0.12
Tnfsf9P41274 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Tnfsf9P41274 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf9P41274 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Tnfsf9P41274 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms