Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Sox6P40645 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox6P40645 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox6P40645 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sox6P40645 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox6P40645 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox6P40645 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.12□□□□□ -0.15
Sox6P40645 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Gm34391-201ENSMUST00000203706 907 ntBASIC14.12□□□□□ -0.15
Sox6P40645 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Sox6P40645 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox6P40645 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.11□□□□□ -0.15
Sox6P40645 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sox6P40645 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.11□□□□□ -0.15
Sox6P40645 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Sox6P40645 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Gm4459-201ENSMUST00000118750 468 ntBASIC14.11□□□□□ -0.15
Sox6P40645 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Sox6P40645 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox6P40645 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox6P40645 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox6P40645 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox6P40645 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.11□□□□□ -0.15
Sox6P40645 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox6P40645 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox6P40645 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox6P40645 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox6P40645 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Sox6P40645 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.11□□□□□ -0.15
Sox6P40645 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Sox6P40645 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.11□□□□□ -0.15
Sox6P40645 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox6P40645 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sox6P40645 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.1□□□□□ -0.15
Sox6P40645 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox6P40645 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sox6P40645 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox6P40645 Gm27459-201ENSMUST00000184860 107 ntBASIC14.1□□□□□ -0.15
Sox6P40645 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox6P40645 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox6P40645 Gm8655-201ENSMUST00000221159 852 ntBASIC14.1□□□□□ -0.15
Sox6P40645 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms