Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VhlP40338 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 Gm8318-201ENSMUST00000182954 872 ntBASIC12.33□□□□□ -0.44
VhlP40338 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.33□□□□□ -0.44
VhlP40338 Gm18622-201ENSMUST00000219361 595 ntBASIC12.33□□□□□ -0.44
VhlP40338 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.33□□□□□ -0.44
VhlP40338 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.33□□□□□ -0.44
VhlP40338 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VhlP40338 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VhlP40338 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VhlP40338 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
VhlP40338 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.32□□□□□ -0.44
VhlP40338 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.32□□□□□ -0.44
VhlP40338 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.32□□□□□ -0.44
VhlP40338 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VhlP40338 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VhlP40338 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
VhlP40338 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
VhlP40338 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
VhlP40338 Gm12497-201ENSMUST00000138778 237 ntBASIC12.32□□□□□ -0.44
VhlP40338 Mir3081-201ENSMUST00000175305 84 ntBASIC12.32□□□□□ -0.44
VhlP40338 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.32□□□□□ -0.44
VhlP40338 Gm6345-202ENSMUST00000180900 204 ntBASIC12.32□□□□□ -0.44
VhlP40338 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.32□□□□□ -0.44
VhlP40338 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.32□□□□□ -0.44
VhlP40338 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
VhlP40338 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.32□□□□□ -0.44
VhlP40338 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
VhlP40338 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.32□□□□□ -0.44
VhlP40338 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.32□□□□□ -0.44
VhlP40338 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
VhlP40338 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VhlP40338 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VhlP40338 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VhlP40338 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
VhlP40338 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.31□□□□□ -0.44
VhlP40338 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VhlP40338 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms