Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC19.63■□□□□ 0.73
Col18a1P39061 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC19.63■□□□□ 0.73
Col18a1P39061 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col18a1P39061 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col18a1P39061 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col18a1P39061 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Col18a1P39061 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Col18a1P39061 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col18a1P39061 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Col18a1P39061 Gm8801-201ENSMUST00000173255 1064 ntBASIC19.62■□□□□ 0.73
Col18a1P39061 Gm21470-201ENSMUST00000187680 696 ntBASIC19.62■□□□□ 0.73
Col18a1P39061 AC192088.1-201ENSMUST00000227561 301 ntBASIC19.62■□□□□ 0.73
Col18a1P39061 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.62■□□□□ 0.73
Col18a1P39061 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC19.62■□□□□ 0.73
Col18a1P39061 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col18a1P39061 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
Col18a1P39061 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col18a1P39061 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col18a1P39061 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col18a1P39061 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col18a1P39061 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC19.61■□□□□ 0.73
Col18a1P39061 Gm27847-201ENSMUST00000183711 107 ntBASIC19.61■□□□□ 0.73
Col18a1P39061 Gm27375-201ENSMUST00000183799 107 ntBASIC19.61■□□□□ 0.73
Col18a1P39061 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC19.61■□□□□ 0.73
Col18a1P39061 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Col18a1P39061 AC154276.1-201ENSMUST00000228874 1299 ntBASIC19.61■□□□□ 0.73
Col18a1P39061 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Col18a1P39061 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Gm22018-201ENSMUST00000104357 131 ntBASIC19.6■□□□□ 0.73
Col18a1P39061 Gm13612-201ENSMUST00000119276 390 ntBASIC19.6■□□□□ 0.73
Col18a1P39061 Gm13689-201ENSMUST00000119360 685 ntBASIC19.6■□□□□ 0.73
Col18a1P39061 Gm13350-201ENSMUST00000120519 479 ntBASIC19.6■□□□□ 0.73
Col18a1P39061 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC19.6■□□□□ 0.73
Col18a1P39061 Gm27243-201ENSMUST00000183964 521 ntBASIC19.6■□□□□ 0.73
Col18a1P39061 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC19.6■□□□□ 0.73
Col18a1P39061 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC19.6■□□□□ 0.73
Col18a1P39061 Gm4804-201ENSMUST00000182234 999 ntBASIC19.6■□□□□ 0.73
Col18a1P39061 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC19.6■□□□□ 0.73
Col18a1P39061 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col18a1P39061 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Col18a1P39061 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Col18a1P39061 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col18a1P39061 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Col18a1P39061 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC19.59■□□□□ 0.73
Col18a1P39061 Gm8565-201ENSMUST00000183259 1014 ntBASIC19.59■□□□□ 0.73
Col18a1P39061 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Gm6013-201ENSMUST00000212264 699 ntBASIC19.59■□□□□ 0.73
Col18a1P39061 Gm18934-201ENSMUST00000216671 1044 ntBASIC19.59■□□□□ 0.73
Col18a1P39061 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC19.59■□□□□ 0.73
Col18a1P39061 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col18a1P39061 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col18a1P39061 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col18a1P39061 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col18a1P39061 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.58■□□□□ 0.73
Col18a1P39061 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.58■□□□□ 0.73
Col18a1P39061 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col18a1P39061 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col18a1P39061 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Col18a1P39061 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC19.58■□□□□ 0.73
Col18a1P39061 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC19.58■□□□□ 0.73
Col18a1P39061 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC19.58■□□□□ 0.73
Col18a1P39061 Gm6983-201ENSMUST00000214912 628 ntBASIC19.58■□□□□ 0.73
Col18a1P39061 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC19.58■□□□□ 0.73
Col18a1P39061 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Col18a1P39061 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms