Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Foxa1P35582 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.89□□□□□ -0.19
Foxa1P35582 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Foxa1P35582 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.89□□□□□ -0.19
Foxa1P35582 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Foxa1P35582 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.88□□□□□ -0.19
Foxa1P35582 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Foxa1P35582 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.88□□□□□ -0.19
Foxa1P35582 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Foxa1P35582 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.88□□□□□ -0.19
Foxa1P35582 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Foxa1P35582 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Foxa1P35582 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Foxa1P35582 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Foxa1P35582 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Foxa1P35582 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Foxa1P35582 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.88□□□□□ -0.19
Foxa1P35582 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxa1P35582 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxa1P35582 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.87□□□□□ -0.19
Foxa1P35582 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxa1P35582 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Foxa1P35582 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Foxa1P35582 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.87□□□□□ -0.19
Foxa1P35582 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Foxa1P35582 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxa1P35582 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.87□□□□□ -0.19
Foxa1P35582 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.87□□□□□ -0.19
Foxa1P35582 Gm43514-201ENSMUST00000198852 424 ntBASIC13.87□□□□□ -0.19
Foxa1P35582 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Foxa1P35582 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Foxa1P35582 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.87□□□□□ -0.19
Foxa1P35582 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.87□□□□□ -0.19
Foxa1P35582 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Foxa1P35582 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Foxa1P35582 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Foxa1P35582 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Foxa1P35582 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.86□□□□□ -0.19
Foxa1P35582 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Foxa1P35582 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.86□□□□□ -0.19
Foxa1P35582 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Foxa1P35582 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Foxa1P35582 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms