Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.95□□□□□ -0.18
Hoxc5P32043 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.95□□□□□ -0.18
Hoxc5P32043 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Gm4535-201ENSMUST00000182274 558 ntBASIC13.95□□□□□ -0.18
Hoxc5P32043 Gm43347-201ENSMUST00000200226 580 ntBASIC13.95□□□□□ -0.18
Hoxc5P32043 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.95□□□□□ -0.18
Hoxc5P32043 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.95□□□□□ -0.18
Hoxc5P32043 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.95□□□□□ -0.18
Hoxc5P32043 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Gm10355-201ENSMUST00000097146 517 ntBASIC13.95□□□□□ -0.18
Hoxc5P32043 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.95□□□□□ -0.18
Hoxc5P32043 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hoxc5P32043 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Hoxc5P32043 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc5P32043 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc5P32043 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc5P32043 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Hoxc5P32043 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc5P32043 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc5P32043 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc5P32043 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.93□□□□□ -0.18
Hoxc5P32043 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Gm10819-201ENSMUST00000099988 561 ntBASIC13.93□□□□□ -0.18
Hoxc5P32043 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc5P32043 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc5P32043 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms