Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm22189-201ENSMUST00000103822 86 ntBASIC16.86■□□□□ 0.29
Col2a1P28481 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Mir125a-201ENSMUST00000083545 68 ntBASIC16.86■□□□□ 0.29
Col2a1P28481 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.86■□□□□ 0.29
Col2a1P28481 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col2a1P28481 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Col2a1P28481 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.86■□□□□ 0.29
Col2a1P28481 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Col2a1P28481 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.86■□□□□ 0.29
Col2a1P28481 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col2a1P28481 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.85■□□□□ 0.29
Col2a1P28481 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.85■□□□□ 0.29
Col2a1P28481 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.85■□□□□ 0.29
Col2a1P28481 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Col2a1P28481 Gm7488-201ENSMUST00000117148 684 ntBASIC16.85■□□□□ 0.29
Col2a1P28481 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Col2a1P28481 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.85■□□□□ 0.29
Col2a1P28481 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.85■□□□□ 0.29
Col2a1P28481 Gm9229-201ENSMUST00000222777 126 ntBASIC16.85■□□□□ 0.29
Col2a1P28481 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col2a1P28481 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.85■□□□□ 0.29
Col2a1P28481 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col2a1P28481 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col2a1P28481 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.84■□□□□ 0.29
Col2a1P28481 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.84■□□□□ 0.29
Col2a1P28481 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Col2a1P28481 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.84■□□□□ 0.29
Col2a1P28481 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.84■□□□□ 0.29
Col2a1P28481 Gm29667-201ENSMUST00000190817 490 ntBASIC16.84■□□□□ 0.29
Col2a1P28481 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col2a1P28481 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col2a1P28481 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col2a1P28481 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col2a1P28481 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col2a1P28481 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Col2a1P28481 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col2a1P28481 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col2a1P28481 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col2a1P28481 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col2a1P28481 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col2a1P28481 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.83■□□□□ 0.28
Col2a1P28481 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.83■□□□□ 0.28
Col2a1P28481 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms