Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.72□□□□□ -0.53
Ccl6P27784 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccl6P27784 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccl6P27784 Gm7862-201ENSMUST00000121461 292 ntBASIC11.72□□□□□ -0.53
Ccl6P27784 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccl6P27784 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl6P27784 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccl6P27784 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl6P27784 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl6P27784 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccl6P27784 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl6P27784 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.72□□□□□ -0.53
Ccl6P27784 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl6P27784 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Gm5682-201ENSMUST00000173402 505 ntBASIC11.71□□□□□ -0.53
Ccl6P27784 Gm10499-201ENSMUST00000174094 934 ntBASIC11.71□□□□□ -0.53
Ccl6P27784 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl6P27784 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl6P27784 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl6P27784 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl6P27784 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl6P27784 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl6P27784 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl6P27784 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl6P27784 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl6P27784 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccl6P27784 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.7□□□□□ -0.54
Ccl6P27784 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccl6P27784 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ccl6P27784 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.7□□□□□ -0.54
Ccl6P27784 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.7□□□□□ -0.54
Ccl6P27784 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.7□□□□□ -0.54
Ccl6P27784 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.7□□□□□ -0.54
Ccl6P27784 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.7□□□□□ -0.54
Ccl6P27784 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ccl6P27784 Gm7461-201ENSMUST00000058918 827 ntBASIC11.7□□□□□ -0.54
Ccl6P27784 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ccl6P27784 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl6P27784 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.7□□□□□ -0.54
Ccl6P27784 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ccl6P27784 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.69□□□□□ -0.54
Ccl6P27784 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Ccl6P27784 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ccl6P27784 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccl6P27784 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms