Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6aP27664 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pde6aP27664 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pde6aP27664 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6aP27664 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pde6aP27664 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pde6aP27664 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pde6aP27664 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.39■□□□□ 0.37
Pde6aP27664 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.39■□□□□ 0.37
Pde6aP27664 Gm16026-204ENSMUST00000162652 683 ntBASIC17.39■□□□□ 0.37
Pde6aP27664 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pde6aP27664 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.39■□□□□ 0.37
Pde6aP27664 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.39■□□□□ 0.37
Pde6aP27664 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pde6aP27664 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pde6aP27664 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Pde6aP27664 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.38■□□□□ 0.37
Pde6aP27664 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pde6aP27664 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.38■□□□□ 0.37
Pde6aP27664 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.38■□□□□ 0.37
Pde6aP27664 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.38■□□□□ 0.37
Pde6aP27664 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.38■□□□□ 0.37
Pde6aP27664 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Rpph1-201ENSMUST00000175096 319 ntBASIC17.38■□□□□ 0.37
Pde6aP27664 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.38■□□□□ 0.37
Pde6aP27664 Gm20553-201ENSMUST00000204205 844 ntBASIC17.38■□□□□ 0.37
Pde6aP27664 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pde6aP27664 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Pde6aP27664 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.38■□□□□ 0.37
Pde6aP27664 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pde6aP27664 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pde6aP27664 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.37■□□□□ 0.37
Pde6aP27664 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.37■□□□□ 0.37
Pde6aP27664 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.37■□□□□ 0.37
Pde6aP27664 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.37■□□□□ 0.37
Pde6aP27664 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.37■□□□□ 0.37
Pde6aP27664 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.37■□□□□ 0.37
Pde6aP27664 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pde6aP27664 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pde6aP27664 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pde6aP27664 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pde6aP27664 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pde6aP27664 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.36■□□□□ 0.37
Pde6aP27664 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pde6aP27664 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.36■□□□□ 0.37
Pde6aP27664 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms