Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.57□□□□□ -0.24
Cd40P27512 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.57□□□□□ -0.24
Cd40P27512 AW822252-206ENSMUST00000208904 237 ntBASIC13.57□□□□□ -0.24
Cd40P27512 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.57□□□□□ -0.24
Cd40P27512 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.57□□□□□ -0.24
Cd40P27512 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.57□□□□□ -0.24
Cd40P27512 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.57□□□□□ -0.24
Cd40P27512 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Cd40P27512 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cd40P27512 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.56□□□□□ -0.24
Cd40P27512 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cd40P27512 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cd40P27512 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cd40P27512 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.56□□□□□ -0.24
Cd40P27512 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.56□□□□□ -0.24
Cd40P27512 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.56□□□□□ -0.24
Cd40P27512 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.56□□□□□ -0.24
Cd40P27512 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.56□□□□□ -0.24
Cd40P27512 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.56□□□□□ -0.24
Cd40P27512 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.56□□□□□ -0.24
Cd40P27512 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Cd40P27512 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cd40P27512 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cd40P27512 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cd40P27512 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.55□□□□□ -0.24
Cd40P27512 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Gm43514-201ENSMUST00000198852 424 ntBASIC13.55□□□□□ -0.24
Cd40P27512 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cd40P27512 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.55□□□□□ -0.24
Cd40P27512 Gm10154-201ENSMUST00000084445 354 ntBASIC13.55□□□□□ -0.24
Cd40P27512 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cd40P27512 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cd40P27512 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms