Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.42■□□□□ 0.06
Nfkb1P25799 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nfkb1P25799 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nfkb1P25799 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nfkb1P25799 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nfkb1P25799 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.41■□□□□ 0.06
Nfkb1P25799 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.41■□□□□ 0.06
Nfkb1P25799 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nfkb1P25799 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nfkb1P25799 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.4■□□□□ 0.06
Nfkb1P25799 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.4■□□□□ 0.06
Nfkb1P25799 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.4■□□□□ 0.06
Nfkb1P25799 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nfkb1P25799 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nfkb1P25799 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.39■□□□□ 0.05
Nfkb1P25799 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Gm44872-201ENSMUST00000207864 420 ntBASIC15.39■□□□□ 0.05
Nfkb1P25799 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.39■□□□□ 0.05
Nfkb1P25799 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nfkb1P25799 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nfkb1P25799 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms