Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Col8a2P25318 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Col8a2P25318 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col8a2P25318 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.54□□□□□ -0.4
Col8a2P25318 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Col8a2P25318 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Col8a2P25318 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.53□□□□□ -0.4
Col8a2P25318 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col8a2P25318 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.53□□□□□ -0.4
Col8a2P25318 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.53□□□□□ -0.4
Col8a2P25318 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col8a2P25318 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col8a2P25318 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Gm11025-201ENSMUST00000140773 466 ntBASIC12.53□□□□□ -0.4
Col8a2P25318 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Gm25925-201ENSMUST00000158314 306 ntBASIC12.53□□□□□ -0.4
Col8a2P25318 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col8a2P25318 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.53□□□□□ -0.4
Col8a2P25318 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.53□□□□□ -0.4
Col8a2P25318 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.53□□□□□ -0.4
Col8a2P25318 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Col8a2P25318 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col8a2P25318 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col8a2P25318 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col8a2P25318 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
Col8a2P25318 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col8a2P25318 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.53□□□□□ -0.4
Col8a2P25318 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col8a2P25318 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Col8a2P25318 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Col8a2P25318 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col8a2P25318 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Col8a2P25318 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.52□□□□□ -0.41
Col8a2P25318 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Col8a2P25318 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.52□□□□□ -0.41
Col8a2P25318 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Col8a2P25318 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.51□□□□□ -0.41
Col8a2P25318 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Col8a2P25318 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.51□□□□□ -0.41
Col8a2P25318 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.51□□□□□ -0.41
Col8a2P25318 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Col8a2P25318 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Col8a2P25318 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms