Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm10154-201ENSMUST00000084445 354 ntBASIC16.4■□□□□ 0.22
Pde6bP23440 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.4■□□□□ 0.22
Pde6bP23440 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pde6bP23440 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.4■□□□□ 0.22
Pde6bP23440 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Pde6bP23440 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.39■□□□□ 0.21
Pde6bP23440 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.39■□□□□ 0.21
Pde6bP23440 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.39■□□□□ 0.21
Pde6bP23440 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.39■□□□□ 0.21
Pde6bP23440 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.39■□□□□ 0.21
Pde6bP23440 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pde6bP23440 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.39■□□□□ 0.21
Pde6bP23440 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.38■□□□□ 0.21
Pde6bP23440 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pde6bP23440 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.38■□□□□ 0.21
Pde6bP23440 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.38■□□□□ 0.21
Pde6bP23440 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pde6bP23440 Gm25948-201ENSMUST00000175334 112 ntBASIC16.38■□□□□ 0.21
Pde6bP23440 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Gm18057-201ENSMUST00000208220 503 ntBASIC16.38■□□□□ 0.21
Pde6bP23440 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pde6bP23440 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pde6bP23440 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Pde6bP23440 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pde6bP23440 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.38■□□□□ 0.21
Pde6bP23440 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pde6bP23440 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pde6bP23440 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pde6bP23440 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.37■□□□□ 0.21
Pde6bP23440 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.37■□□□□ 0.21
Pde6bP23440 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.37■□□□□ 0.21
Pde6bP23440 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.37■□□□□ 0.21
Pde6bP23440 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.37■□□□□ 0.21
Pde6bP23440 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Pde6bP23440 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pde6bP23440 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.37■□□□□ 0.21
Pde6bP23440 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Pde6bP23440 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pde6bP23440 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Pde6bP23440 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Pde6bP23440 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pde6bP23440 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms