Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Clk1P22518 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.01□□□□□ -0.17
Clk1P22518 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Clk1P22518 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.01□□□□□ -0.17
Clk1P22518 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Clk1P22518 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clk1P22518 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14□□□□□ -0.17
Clk1P22518 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Clk1P22518 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clk1P22518 Gm38273-201ENSMUST00000194987 2382 ntBASIC14□□□□□ -0.17
Clk1P22518 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14□□□□□ -0.17
Clk1P22518 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Clk1P22518 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Gm7230-201ENSMUST00000173026 815 ntBASIC14□□□□□ -0.17
Clk1P22518 Gm27646-201ENSMUST00000183989 110 ntBASIC14□□□□□ -0.17
Clk1P22518 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Gm18195-201ENSMUST00000207604 706 ntBASIC14□□□□□ -0.17
Clk1P22518 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clk1P22518 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clk1P22518 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Clk1P22518 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.99□□□□□ -0.17
Clk1P22518 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.99□□□□□ -0.17
Clk1P22518 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.99□□□□□ -0.17
Clk1P22518 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.99□□□□□ -0.17
Clk1P22518 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.99□□□□□ -0.17
Clk1P22518 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.99□□□□□ -0.17
Clk1P22518 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.99□□□□□ -0.17
Clk1P22518 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Clk1P22518 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.99□□□□□ -0.17
Clk1P22518 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clk1P22518 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.98□□□□□ -0.17
Clk1P22518 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk1P22518 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk1P22518 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk1P22518 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk1P22518 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk1P22518 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clk1P22518 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Clk1P22518 Gm18489-201ENSMUST00000172565 551 ntBASIC13.98□□□□□ -0.17
Clk1P22518 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.98□□□□□ -0.17
Clk1P22518 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms