Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cntn1P12960 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.4□□□□□ -0.1
Cntn1P12960 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.4□□□□□ -0.1
Cntn1P12960 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.4□□□□□ -0.1
Cntn1P12960 Gm27494-201ENSMUST00000184735 189 ntBASIC14.4□□□□□ -0.1
Cntn1P12960 Gm2272-201ENSMUST00000194903 582 ntBASIC14.4□□□□□ -0.1
Cntn1P12960 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cntn1P12960 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.4□□□□□ -0.1
Cntn1P12960 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.4□□□□□ -0.1
Cntn1P12960 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cntn1P12960 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cntn1P12960 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cntn1P12960 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cntn1P12960 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.39□□□□□ -0.11
Cntn1P12960 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Cntn1P12960 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cntn1P12960 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Mir1895-201ENSMUST00000122615 79 ntBASIC14.39□□□□□ -0.11
Cntn1P12960 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.39□□□□□ -0.11
Cntn1P12960 Gm11025-201ENSMUST00000140773 466 ntBASIC14.39□□□□□ -0.11
Cntn1P12960 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cntn1P12960 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.39□□□□□ -0.11
Cntn1P12960 Gm20553-201ENSMUST00000204205 844 ntBASIC14.39□□□□□ -0.11
Cntn1P12960 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.39□□□□□ -0.11
Cntn1P12960 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Cntn1P12960 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.39□□□□□ -0.11
Cntn1P12960 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cntn1P12960 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Cntn1P12960 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Cntn1P12960 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cntn1P12960 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cntn1P12960 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Rpph1-201ENSMUST00000175096 319 ntBASIC14.38□□□□□ -0.11
Cntn1P12960 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.38□□□□□ -0.11
Cntn1P12960 Gm45612-201ENSMUST00000211320 160 ntBASIC14.38□□□□□ -0.11
Cntn1P12960 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cntn1P12960 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.38□□□□□ -0.11
Cntn1P12960 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cntn1P12960 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms