Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hoxc6P10629 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
Hoxc6P10629 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.58■□□□□ 0.24
Hoxc6P10629 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.58■□□□□ 0.24
Hoxc6P10629 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.58■□□□□ 0.24
Hoxc6P10629 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Hoxc6P10629 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hoxc6P10629 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Dancr-204ENSMUST00000132389 2347 ntBASIC16.58■□□□□ 0.24
Hoxc6P10629 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hoxc6P10629 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.58■□□□□ 0.24
Hoxc6P10629 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc6P10629 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.57■□□□□ 0.24
Hoxc6P10629 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.57■□□□□ 0.24
Hoxc6P10629 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.57■□□□□ 0.24
Hoxc6P10629 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Hoxc6P10629 Gm5479-201ENSMUST00000160578 435 ntBASIC16.57■□□□□ 0.24
Hoxc6P10629 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Gm29667-201ENSMUST00000190817 490 ntBASIC16.57■□□□□ 0.24
Hoxc6P10629 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.57■□□□□ 0.24
Hoxc6P10629 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc6P10629 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.56■□□□□ 0.24
Hoxc6P10629 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Hoxc6P10629 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hoxc6P10629 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.56■□□□□ 0.24
Hoxc6P10629 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
Hoxc6P10629 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.56■□□□□ 0.24
Hoxc6P10629 Gm12859-201ENSMUST00000117834 427 ntBASIC16.56■□□□□ 0.24
Hoxc6P10629 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.56■□□□□ 0.24
Hoxc6P10629 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.56■□□□□ 0.24
Hoxc6P10629 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.56■□□□□ 0.24
Hoxc6P10629 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Hoxc6P10629 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hoxc6P10629 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.56■□□□□ 0.24
Hoxc6P10629 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hoxc6P10629 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hoxc6P10629 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.55■□□□□ 0.24
Hoxc6P10629 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.55■□□□□ 0.24
Hoxc6P10629 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hoxc6P10629 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.55■□□□□ 0.24
Hoxc6P10629 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hoxc6P10629 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.54■□□□□ 0.24
Hoxc6P10629 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Hoxc6P10629 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Asic1-205ENSMUST00000228185 1818 ntBASIC16.54■□□□□ 0.24
Hoxc6P10629 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Celf4-206ENSMUST00000224553 1729 ntBASIC16.54■□□□□ 0.24
Hoxc6P10629 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.54■□□□□ 0.24
Hoxc6P10629 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hoxc6P10629 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.54■□□□□ 0.24
Hoxc6P10629 Gm14127-201ENSMUST00000117906 678 ntBASIC16.54■□□□□ 0.24
Hoxc6P10629 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.54■□□□□ 0.24
Hoxc6P10629 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms