Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Gm44672-201ENSMUST00000206944 1098 ntBASIC10.36□□□□□ -0.75
Smim1P0C8K7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.36□□□□□ -0.75
Smim1P0C8K7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smim1P0C8K7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.35□□□□□ -0.75
Smim1P0C8K7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.35□□□□□ -0.75
Smim1P0C8K7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.35□□□□□ -0.75
Smim1P0C8K7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Gm12085-201ENSMUST00000119263 940 ntBASIC10.35□□□□□ -0.75
Smim1P0C8K7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Gm43183-201ENSMUST00000200632 547 ntBASIC10.35□□□□□ -0.75
Smim1P0C8K7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.35□□□□□ -0.75
Smim1P0C8K7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smim1P0C8K7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Mir6404-201ENSMUST00000183699 94 ntBASIC10.34□□□□□ -0.75
Smim1P0C8K7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smim1P0C8K7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms