Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NclP09405 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NclP09405 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NclP09405 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NclP09405 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
NclP09405 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NclP09405 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
NclP09405 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
NclP09405 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NclP09405 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NclP09405 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC22.24■■□□□ 1.15
NclP09405 Gm25287-201ENSMUST00000103846 110 ntBASIC22.24■■□□□ 1.15
NclP09405 Gm22918-201ENSMUST00000103855 110 ntBASIC22.24■■□□□ 1.15
NclP09405 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC22.24■■□□□ 1.15
NclP09405 Gm18737-201ENSMUST00000173594 937 ntBASIC22.24■■□□□ 1.15
NclP09405 Gm25948-201ENSMUST00000175334 112 ntBASIC22.24■■□□□ 1.15
NclP09405 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NclP09405 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
NclP09405 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclP09405 CT010478.1-201ENSMUST00000220747 2787 ntBASIC22.23■■□□□ 1.15
NclP09405 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
NclP09405 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC22.23■■□□□ 1.15
NclP09405 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC22.23■■□□□ 1.15
NclP09405 AC164567.1-201ENSMUST00000219185 960 ntBASIC22.23■■□□□ 1.15
NclP09405 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
NclP09405 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NclP09405 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
NclP09405 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC22.22■■□□□ 1.15
NclP09405 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC22.22■■□□□ 1.15
NclP09405 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
NclP09405 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC22.22■■□□□ 1.15
NclP09405 AC166341.4-201ENSMUST00000220625 123 ntBASIC22.22■■□□□ 1.15
NclP09405 AC131187.1-201ENSMUST00000224567 809 ntBASIC22.22■■□□□ 1.15
NclP09405 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
NclP09405 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC22.22■■□□□ 1.15
NclP09405 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclP09405 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NclP09405 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 AA543401-201ENSMUST00000164248 1269 ntBASIC22.21■■□□□ 1.15
NclP09405 Gm24158-201ENSMUST00000175263 71 ntBASIC22.21■■□□□ 1.15
NclP09405 Gm10253-201ENSMUST00000194270 940 ntBASIC22.21■■□□□ 1.15
NclP09405 Gm7774-201ENSMUST00000200064 533 ntBASIC22.21■■□□□ 1.15
NclP09405 AC124732.2-201ENSMUST00000221977 316 ntBASIC22.21■■□□□ 1.15
NclP09405 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC22.21■■□□□ 1.15
NclP09405 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC22.21■■□□□ 1.15
NclP09405 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC22.21■■□□□ 1.15
NclP09405 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Gm8096-201ENSMUST00000209921 1591 ntBASIC22.21■■□□□ 1.15
NclP09405 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclP09405 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
NclP09405 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NclP09405 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NclP09405 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC22.2■■□□□ 1.14
NclP09405 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms