Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col4a1P02463 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col4a1P02463 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col4a1P02463 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.23■□□□□ 0.51
Col4a1P02463 Gm20445-201ENSMUST00000061905 565 ntBASIC18.23■□□□□ 0.51
Col4a1P02463 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Col4a1P02463 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a1P02463 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.22■□□□□ 0.51
Col4a1P02463 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col4a1P02463 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC18.22■□□□□ 0.51
Col4a1P02463 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col4a1P02463 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col4a1P02463 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.22■□□□□ 0.51
Col4a1P02463 Gm15678-201ENSMUST00000117573 960 ntBASIC18.22■□□□□ 0.51
Col4a1P02463 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.22■□□□□ 0.51
Col4a1P02463 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.22■□□□□ 0.51
Col4a1P02463 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col4a1P02463 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col4a1P02463 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col4a1P02463 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.21■□□□□ 0.51
Col4a1P02463 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.21■□□□□ 0.51
Col4a1P02463 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.21■□□□□ 0.51
Col4a1P02463 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.21■□□□□ 0.51
Col4a1P02463 Gm10766-202ENSMUST00000194123 606 ntBASIC18.21■□□□□ 0.51
Col4a1P02463 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.21■□□□□ 0.51
Col4a1P02463 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col4a1P02463 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col4a1P02463 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Gm6745-201ENSMUST00000199216 526 ntBASIC18.2■□□□□ 0.5
Col4a1P02463 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Gm9229-201ENSMUST00000222777 126 ntBASIC18.2■□□□□ 0.5
Col4a1P02463 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col4a1P02463 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col4a1P02463 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.19■□□□□ 0.5
Col4a1P02463 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Col4a1P02463 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Col4a1P02463 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.19■□□□□ 0.5
Col4a1P02463 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.19■□□□□ 0.5
Col4a1P02463 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.19■□□□□ 0.5
Col4a1P02463 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col4a1P02463 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms