Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Gm43347-201ENSMUST00000200226 580 ntBASIC10.65□□□□□ -0.7
Sh2d1aO88890 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.65□□□□□ -0.7
Sh2d1aO88890 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sh2d1aO88890 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.65□□□□□ -0.71
Sh2d1aO88890 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Sh2d1aO88890 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sh2d1aO88890 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.65□□□□□ -0.71
Sh2d1aO88890 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sh2d1aO88890 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Sh2d1aO88890 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
Sh2d1aO88890 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.65□□□□□ -0.71
Sh2d1aO88890 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Sh2d1aO88890 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.64□□□□□ -0.71
Sh2d1aO88890 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.64□□□□□ -0.71
Sh2d1aO88890 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Sh2d1aO88890 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC10.63□□□□□ -0.71
Sh2d1aO88890 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.63□□□□□ -0.71
Sh2d1aO88890 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.63□□□□□ -0.71
Sh2d1aO88890 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.63□□□□□ -0.71
Sh2d1aO88890 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.63□□□□□ -0.71
Sh2d1aO88890 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Sh2d1aO88890 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms