Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Gm7222-201ENSMUST00000117512 906 ntBASIC14.41□□□□□ -0.1
Hcn1O88704 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.41□□□□□ -0.1
Hcn1O88704 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.41□□□□□ -0.1
Hcn1O88704 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Efs-202ENSMUST00000227037 2540 ntBASIC14.41□□□□□ -0.1
Hcn1O88704 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Hcn1O88704 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hcn1O88704 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hcn1O88704 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hcn1O88704 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.4□□□□□ -0.1
Hcn1O88704 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Mir5126-201ENSMUST00000175513 77 ntBASIC14.4□□□□□ -0.1
Hcn1O88704 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
Hcn1O88704 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.4□□□□□ -0.1
Hcn1O88704 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Hcn1O88704 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hcn1O88704 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hcn1O88704 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.4□□□□□ -0.1
Hcn1O88704 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hcn1O88704 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hcn1O88704 Gm12350-201ENSMUST00000121208 462 ntBASIC14.39□□□□□ -0.11
Hcn1O88704 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.39□□□□□ -0.11
Hcn1O88704 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Gm19164-201ENSMUST00000210667 640 ntBASIC14.39□□□□□ -0.11
Hcn1O88704 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.39□□□□□ -0.11
Hcn1O88704 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Hcn1O88704 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Hcn1O88704 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hcn1O88704 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.38□□□□□ -0.11
Hcn1O88704 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.38□□□□□ -0.11
Hcn1O88704 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.38□□□□□ -0.11
Hcn1O88704 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hcn1O88704 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms