Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Gm17150-201ENSMUST00000165577 381 ntBASIC16.29■□□□□ 0.2
Slc6a20bO88575 Gm3436-201ENSMUST00000179930 840 ntBASIC16.29■□□□□ 0.2
Slc6a20bO88575 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Slc6a20bO88575 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc6a20bO88575 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Dupd1-202ENSMUST00000224735 548 ntBASIC16.28■□□□□ 0.2
Slc6a20bO88575 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a20bO88575 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Gm11918-201ENSMUST00000121660 179 ntBASIC16.27■□□□□ 0.2
Slc6a20bO88575 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Gm10766-202ENSMUST00000194123 606 ntBASIC16.27■□□□□ 0.2
Slc6a20bO88575 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.27■□□□□ 0.2
Slc6a20bO88575 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a20bO88575 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a20bO88575 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a20bO88575 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20bO88575 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20bO88575 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20bO88575 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.26■□□□□ 0.19
Slc6a20bO88575 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20bO88575 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Slc6a20bO88575 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20bO88575 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a20bO88575 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms