Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.69■□□□□ 0.42
Slc4a4O88343 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Slc4a4O88343 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Rprl2-201ENSMUST00000157150 290 ntBASIC17.69■□□□□ 0.42
Slc4a4O88343 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Slc4a4O88343 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Slc4a4O88343 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Slc4a4O88343 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.69■□□□□ 0.42
Slc4a4O88343 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slc4a4O88343 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.69■□□□□ 0.42
Slc4a4O88343 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Slc4a4O88343 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc4a4O88343 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc4a4O88343 Gm44335-201ENSMUST00000196879 141 ntBASIC17.68■□□□□ 0.42
Slc4a4O88343 Gm44297-201ENSMUST00000198304 141 ntBASIC17.68■□□□□ 0.42
Slc4a4O88343 Gm44346-201ENSMUST00000198851 141 ntBASIC17.68■□□□□ 0.42
Slc4a4O88343 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Slc4a4O88343 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.68■□□□□ 0.42
Slc4a4O88343 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slc4a4O88343 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Slc4a4O88343 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc4a4O88343 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.67■□□□□ 0.42
Slc4a4O88343 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.67■□□□□ 0.42
Slc4a4O88343 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.67■□□□□ 0.42
Slc4a4O88343 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Slc4a4O88343 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.67■□□□□ 0.42
Slc4a4O88343 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.67■□□□□ 0.42
Slc4a4O88343 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc4a4O88343 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Gm18889-201ENSMUST00000174284 929 ntBASIC17.66■□□□□ 0.42
Slc4a4O88343 Gm18057-201ENSMUST00000208220 503 ntBASIC17.66■□□□□ 0.42
Slc4a4O88343 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Slc4a4O88343 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slc4a4O88343 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Slc4a4O88343 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc4a4O88343 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms