Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Mmp8O70138 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.27■□□□□ 0.52
Mmp8O70138 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.27■□□□□ 0.52
Mmp8O70138 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Mmp8O70138 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.27■□□□□ 0.52
Mmp8O70138 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC18.27■□□□□ 0.52
Mmp8O70138 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.27■□□□□ 0.52
Mmp8O70138 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.27■□□□□ 0.52
Mmp8O70138 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.27■□□□□ 0.52
Mmp8O70138 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp8O70138 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp8O70138 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp8O70138 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp8O70138 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp8O70138 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.26■□□□□ 0.51
Mmp8O70138 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Mmp8O70138 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Mmp8O70138 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Mmp8O70138 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Mmp8O70138 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Mmp8O70138 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Gm11594-201ENSMUST00000122313 162 ntBASIC18.26■□□□□ 0.51
Mmp8O70138 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.26■□□□□ 0.51
Mmp8O70138 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
Mmp8O70138 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.26■□□□□ 0.51
Mmp8O70138 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.26■□□□□ 0.51
Mmp8O70138 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Mmp8O70138 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp8O70138 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Mmp8O70138 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Mmp8O70138 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.25■□□□□ 0.51
Mmp8O70138 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Mmp8O70138 Gm17271-201ENSMUST00000165535 355 ntBASIC18.25■□□□□ 0.51
Mmp8O70138 Gm45612-201ENSMUST00000211320 160 ntBASIC18.25■□□□□ 0.51
Mmp8O70138 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.25■□□□□ 0.51
Mmp8O70138 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Mmp8O70138 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.25■□□□□ 0.51
Mmp8O70138 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.25■□□□□ 0.51
Mmp8O70138 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Mmp8O70138 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.25■□□□□ 0.51
Mmp8O70138 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.25■□□□□ 0.51
Mmp8O70138 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.25■□□□□ 0.51
Mmp8O70138 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp8O70138 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Mmp8O70138 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Mmp8O70138 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp8O70138 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms