Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Limk2O54785 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Limk2O54785 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.22■□□□□ 0.03
Limk2O54785 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Limk2O54785 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.22■□□□□ 0.03
Limk2O54785 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.22■□□□□ 0.03
Limk2O54785 Gm44492-201ENSMUST00000197012 141 ntBASIC15.22■□□□□ 0.03
Limk2O54785 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.22■□□□□ 0.03
Limk2O54785 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Limk2O54785 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Limk2O54785 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.22■□□□□ 0.03
Limk2O54785 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Limk2O54785 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Limk2O54785 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Limk2O54785 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Limk2O54785 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Limk2O54785 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Limk2O54785 Gm12008-201ENSMUST00000117791 755 ntBASIC15.21■□□□□ 0.03
Limk2O54785 Gm13597-201ENSMUST00000121239 375 ntBASIC15.21■□□□□ 0.03
Limk2O54785 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.21■□□□□ 0.03
Limk2O54785 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Limk2O54785 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.21■□□□□ 0.03
Limk2O54785 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.21■□□□□ 0.03
Limk2O54785 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.21■□□□□ 0.03
Limk2O54785 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Limk2O54785 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.21■□□□□ 0.03
Limk2O54785 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.21■□□□□ 0.03
Limk2O54785 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.21■□□□□ 0.03
Limk2O54785 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.21■□□□□ 0.03
Limk2O54785 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.21■□□□□ 0.03
Limk2O54785 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Limk2O54785 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
Limk2O54785 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Limk2O54785 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Limk2O54785 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.2■□□□□ 0.02
Limk2O54785 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.2■□□□□ 0.02
Limk2O54785 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Limk2O54785 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Limk2O54785 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Mir1895-201ENSMUST00000122615 79 ntBASIC15.2■□□□□ 0.02
Limk2O54785 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Limk2O54785 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.2■□□□□ 0.02
Limk2O54785 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Limk2O54785 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 127.4 ms