Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm2O35900 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm2O35900 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm2O35900 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.39□□□□□ -0.27
Lsm2O35900 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.39□□□□□ -0.27
Lsm2O35900 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.38□□□□□ -0.27
Lsm2O35900 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm2O35900 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Gm8344-201ENSMUST00000119813 856 ntBASIC13.38□□□□□ -0.27
Lsm2O35900 Gm15794-201ENSMUST00000120182 631 ntBASIC13.38□□□□□ -0.27
Lsm2O35900 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lsm2O35900 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.38□□□□□ -0.27
Lsm2O35900 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm2O35900 Gm18622-201ENSMUST00000219361 595 ntBASIC13.38□□□□□ -0.27
Lsm2O35900 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.38□□□□□ -0.27
Lsm2O35900 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.38□□□□□ -0.27
Lsm2O35900 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm2O35900 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Lsm2O35900 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm2O35900 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.37□□□□□ -0.27
Lsm2O35900 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.37□□□□□ -0.27
Lsm2O35900 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm2O35900 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm2O35900 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.37□□□□□ -0.27
Lsm2O35900 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm2O35900 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Lsm2O35900 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.37□□□□□ -0.27
Lsm2O35900 Gm9013-201ENSMUST00000132939 882 ntBASIC13.37□□□□□ -0.27
Lsm2O35900 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Lsm2O35900 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm2O35900 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm2O35900 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm2O35900 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lsm2O35900 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.36□□□□□ -0.27
Lsm2O35900 Gm6345-202ENSMUST00000180900 204 ntBASIC13.36□□□□□ -0.27
Lsm2O35900 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm2O35900 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms