Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Npc1O35604 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Npc1O35604 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Npc1O35604 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Npc1O35604 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.66□□□□□ -0.06
Npc1O35604 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.66□□□□□ -0.06
Npc1O35604 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Npc1O35604 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Gm18246-201ENSMUST00000221023 728 ntBASIC14.66□□□□□ -0.06
Npc1O35604 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Gm10175-201ENSMUST00000086013 645 ntBASIC14.66□□□□□ -0.06
Npc1O35604 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.66□□□□□ -0.06
Npc1O35604 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Npc1O35604 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Npc1O35604 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.66□□□□□ -0.06
Npc1O35604 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Npc1O35604 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Npc1O35604 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.66□□□□□ -0.06
Npc1O35604 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Npc1O35604 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.65□□□□□ -0.06
Npc1O35604 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
Npc1O35604 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.65□□□□□ -0.06
Npc1O35604 Gm6736-201ENSMUST00000166583 948 ntBASIC14.65□□□□□ -0.06
Npc1O35604 Gm27301-201ENSMUST00000184012 127 ntBASIC14.65□□□□□ -0.06
Npc1O35604 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.65□□□□□ -0.06
Npc1O35604 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.65□□□□□ -0.06
Npc1O35604 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Npc1O35604 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Npc1O35604 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.65□□□□□ -0.06
Npc1O35604 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Npc1O35604 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Npc1O35604 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Npc1O35604 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Npc1O35604 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Gm24513-201ENSMUST00000174964 138 ntBASIC14.64□□□□□ -0.07
Npc1O35604 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.64□□□□□ -0.07
Npc1O35604 Gm27397-201ENSMUST00000184997 107 ntBASIC14.64□□□□□ -0.07
Npc1O35604 Gm2272-201ENSMUST00000194903 582 ntBASIC14.64□□□□□ -0.07
Npc1O35604 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Npc1O35604 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Npc1O35604 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Npc1O35604 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Npc1O35604 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Npc1O35604 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms