Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Gm10231-201ENSMUST00000181584 441 ntBASIC14.81□□□□□ -0.04
Slc1a6O35544 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Mir6982-201ENSMUST00000184354 68 ntBASIC14.81□□□□□ -0.04
Slc1a6O35544 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Gm10175-202ENSMUST00000208752 441 ntBASIC14.81□□□□□ -0.04
Slc1a6O35544 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.81□□□□□ -0.04
Slc1a6O35544 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.81□□□□□ -0.04
Slc1a6O35544 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc1a6O35544 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Gm10252-201ENSMUST00000209541 832 ntBASIC14.8□□□□□ -0.04
Slc1a6O35544 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Gm8655-201ENSMUST00000221159 852 ntBASIC14.8□□□□□ -0.04
Slc1a6O35544 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Slc1a6O35544 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc1a6O35544 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.79□□□□□ -0.04
Slc1a6O35544 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Slc1a6O35544 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Slc1a6O35544 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc1a6O35544 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Slc1a6O35544 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc1a6O35544 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Slc1a6O35544 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Slc1a6O35544 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc1a6O35544 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc1a6O35544 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Slc1a6O35544 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.78□□□□□ -0.04
Slc1a6O35544 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.78□□□□□ -0.04
Slc1a6O35544 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms