Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.28■□□□□ 0.2
Clk2O35491 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.28■□□□□ 0.2
Clk2O35491 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.28■□□□□ 0.2
Clk2O35491 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Clk2O35491 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Gm7774-201ENSMUST00000200064 533 ntBASIC16.28■□□□□ 0.2
Clk2O35491 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.28■□□□□ 0.2
Clk2O35491 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.28■□□□□ 0.2
Clk2O35491 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clk2O35491 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.28■□□□□ 0.2
Clk2O35491 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Clk2O35491 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clk2O35491 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Clk2O35491 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clk2O35491 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Clk2O35491 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clk2O35491 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.27■□□□□ 0.2
Clk2O35491 Gm38225-201ENSMUST00000194001 393 ntBASIC16.27■□□□□ 0.2
Clk2O35491 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clk2O35491 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk2O35491 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk2O35491 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.27■□□□□ 0.19
Clk2O35491 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk2O35491 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clk2O35491 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clk2O35491 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.26■□□□□ 0.19
Clk2O35491 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.26■□□□□ 0.19
Clk2O35491 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.26■□□□□ 0.19
Clk2O35491 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Clk2O35491 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.26■□□□□ 0.19
Clk2O35491 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.26■□□□□ 0.19
Clk2O35491 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.26■□□□□ 0.19
Clk2O35491 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clk2O35491 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk2O35491 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.25■□□□□ 0.19
Clk2O35491 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.25■□□□□ 0.19
Clk2O35491 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk2O35491 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk2O35491 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk2O35491 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clk2O35491 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.25■□□□□ 0.19
Clk2O35491 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clk2O35491 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.25■□□□□ 0.19
Clk2O35491 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clk2O35491 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms