Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Hdac1O09106 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Hdac1O09106 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.88■□□□□ 0.45
Hdac1O09106 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Hdac1O09106 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Hdac1O09106 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hdac1O09106 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Hdac1O09106 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.87■□□□□ 0.45
Hdac1O09106 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hdac1O09106 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Hdac1O09106 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.87■□□□□ 0.45
Hdac1O09106 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.87■□□□□ 0.45
Hdac1O09106 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Hdac1O09106 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.87■□□□□ 0.45
Hdac1O09106 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac1O09106 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.87■□□□□ 0.45
Hdac1O09106 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hdac1O09106 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Hdac1O09106 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hdac1O09106 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.86■□□□□ 0.45
Hdac1O09106 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.86■□□□□ 0.45
Hdac1O09106 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.86■□□□□ 0.45
Hdac1O09106 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hdac1O09106 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hdac1O09106 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.86■□□□□ 0.45
Hdac1O09106 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hdac1O09106 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac1O09106 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Hdac1O09106 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.85■□□□□ 0.45
Hdac1O09106 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hdac1O09106 Gm18489-201ENSMUST00000172565 551 ntBASIC17.85■□□□□ 0.45
Hdac1O09106 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hdac1O09106 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.85■□□□□ 0.45
Hdac1O09106 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac1O09106 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.85■□□□□ 0.45
Hdac1O09106 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms