Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ClockO08785 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.28□□□□□ -0.12
ClockO08785 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ClockO08785 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ClockO08785 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ClockO08785 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ClockO08785 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ClockO08785 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ClockO08785 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ClockO08785 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ClockO08785 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ClockO08785 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
ClockO08785 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ClockO08785 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.27□□□□□ -0.13
ClockO08785 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.27□□□□□ -0.13
ClockO08785 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.27□□□□□ -0.13
ClockO08785 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
ClockO08785 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ClockO08785 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ClockO08785 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.27□□□□□ -0.13
ClockO08785 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ClockO08785 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ClockO08785 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.27□□□□□ -0.13
ClockO08785 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ClockO08785 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ClockO08785 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.26□□□□□ -0.13
ClockO08785 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ClockO08785 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.26□□□□□ -0.13
ClockO08785 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.26□□□□□ -0.13
ClockO08785 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.26□□□□□ -0.13
ClockO08785 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
ClockO08785 Gm18032-201ENSMUST00000222541 538 ntBASIC14.26□□□□□ -0.13
ClockO08785 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ClockO08785 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
ClockO08785 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.26□□□□□ -0.13
ClockO08785 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.26□□□□□ -0.13
ClockO08785 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
ClockO08785 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.26□□□□□ -0.13
ClockO08785 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ClockO08785 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ClockO08785 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClockO08785 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClockO08785 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ClockO08785 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ClockO08785 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClockO08785 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClockO08785 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.25□□□□□ -0.13
ClockO08785 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ClockO08785 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ClockO08785 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms