Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tcof1O08784 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.53■□□□□ 0.4
Tcof1O08784 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
Tcof1O08784 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tcof1O08784 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.53■□□□□ 0.4
Tcof1O08784 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tcof1O08784 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.53■□□□□ 0.4
Tcof1O08784 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.53■□□□□ 0.4
Tcof1O08784 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcof1O08784 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Gm13365-201ENSMUST00000121188 973 ntBASIC17.52■□□□□ 0.4
Tcof1O08784 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.52■□□□□ 0.4
Tcof1O08784 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.52■□□□□ 0.4
Tcof1O08784 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.52■□□□□ 0.4
Tcof1O08784 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.52■□□□□ 0.4
Tcof1O08784 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tcof1O08784 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcof1O08784 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Tcof1O08784 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tcof1O08784 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tcof1O08784 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Tcof1O08784 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tcof1O08784 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tcof1O08784 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.51■□□□□ 0.39
Tcof1O08784 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tcof1O08784 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tcof1O08784 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Tcof1O08784 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.51■□□□□ 0.39
Tcof1O08784 Gm14701-201ENSMUST00000117156 348 ntBASIC17.51■□□□□ 0.39
Tcof1O08784 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.51■□□□□ 0.39
Tcof1O08784 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tcof1O08784 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Tcof1O08784 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.51■□□□□ 0.39
Tcof1O08784 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tcof1O08784 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tcof1O08784 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tcof1O08784 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tcof1O08784 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tcof1O08784 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tcof1O08784 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tcof1O08784 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tcof1O08784 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms