Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Gm9103-201ENSMUST00000119371 405 ntBASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tnfrsf11bO08712 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf11bO08712 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Gm7222-201ENSMUST00000117512 906 ntBASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Gm6376-201ENSMUST00000209407 580 ntBASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf11bO08712 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.23■□□□□ 0.03
Tnfrsf11bO08712 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms