Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Gm9522-201ENSMUST00000182394 926 ntBASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Gm9182-201ENSMUST00000217829 639 ntBASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
B020004C17RikJ3QP07 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Gm45384-201ENSMUST00000210451 277 ntBASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.66■□□□□ 0.26
B020004C17RikJ3QP07 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gm11478-201ENSMUST00000117851 599 ntBASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gm21854-201ENSMUST00000179901 471 ntBASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
B020004C17RikJ3QP07 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
B020004C17RikJ3QP07 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
B020004C17RikJ3QP07 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
B020004C17RikJ3QP07 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms