Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Gm13312-201ENSMUST00000119631 718 ntBASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shisa8J3QNX5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm11950-201ENSMUST00000121615 838 ntBASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm23547-201ENSMUST00000158210 271 ntBASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Gm5587-201ENSMUST00000206270 674 ntBASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shisa8J3QNX5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa8J3QNX5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa8J3QNX5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Shisa8J3QNX5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shisa8J3QNX5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Gm19164-201ENSMUST00000210667 640 ntBASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shisa8J3QNX5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa8J3QNX5 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa8J3QNX5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa8J3QNX5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa8J3QNX5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Shisa8J3QNX5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shisa8J3QNX5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms