Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-3J3QMG8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-3J3QMG8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-3J3QMG8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Gm13597-201ENSMUST00000121239 375 ntBASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-3J3QMG8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms