Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Gm27486-201ENSMUST00000184923 80 ntBASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc85cE9Q6B2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Gm18056-201ENSMUST00000207670 568 ntBASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Gm18061-201ENSMUST00000208350 562 ntBASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Gm18063-201ENSMUST00000208529 568 ntBASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Gm18052-201ENSMUST00000208750 559 ntBASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Gm7399-201ENSMUST00000032395 858 ntBASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc85cE9Q6B2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Zscan30-202ENSMUST00000224144 1458 ntBASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc85cE9Q6B2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85cE9Q6B2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85cE9Q6B2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85cE9Q6B2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85cE9Q6B2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc85cE9Q6B2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC18.33■□□□□ 0.53
Ccdc85cE9Q6B2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Gm18307-201ENSMUST00000206864 949 ntBASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.33■□□□□ 0.52
Ccdc85cE9Q6B2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85cE9Q6B2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85cE9Q6B2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc85cE9Q6B2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms