Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Gm44335-201ENSMUST00000196879 141 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Gm44297-201ENSMUST00000198304 141 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Gm44346-201ENSMUST00000198851 141 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh17E9PXF0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Gm2272-201ENSMUST00000194903 582 ntBASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdh17E9PXF0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Rprl2-201ENSMUST00000157150 290 ntBASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Gm5312-201ENSMUST00000203728 547 ntBASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh17E9PXF0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh17E9PXF0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdh17E9PXF0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh17E9PXF0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh17E9PXF0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh17E9PXF0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Gm44872-201ENSMUST00000207864 420 ntBASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh17E9PXF0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms