Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a3E9PWQ3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a3E9PWQ3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm13047-201ENSMUST00000117116 815 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm37835-201ENSMUST00000193305 361 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm6082-201ENSMUST00000215204 454 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gm43058-201ENSMUST00000197645 625 ntBASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a3E9PWQ3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Gm13813-201ENSMUST00000120998 787 ntBASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Gm27331-201ENSMUST00000183705 60 ntBASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Gm4909-201ENSMUST00000118749 794 ntBASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Gm6334-201ENSMUST00000207083 228 ntBASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Gm18935-201ENSMUST00000212692 664 ntBASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col6a3E9PWQ3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Mir1943-201ENSMUST00000158276 73 ntBASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms